Okay I finally got it to work so I'm going to post my process here in case anyone was confused about the steps for EmuTool that were initially posted or were running into partition issues with Hekate.
A brief explanation on why I did this in case someone is in the same predicament.
I was trying to upgrade my SD card to a larger size and during the process I accidently updated my switch to the new OFW 11.0.1, Since SXOS still hasn't come out with a new boot.dat file for Nintendo's newest firmware update I needed to transfer my old emunand and boot.dat on an old SD card (which I was using back on CFW 10.0.2) to my new SD card. Keep in mind I run SXOS so if you are not running SXOS most of these steps will not work for you.
Also, if you are doing this because you accidently upgraded to the latest firmware and you want to restore your emunand, this process will only allow you to boot into CFW, I never use OFW anyway so I personally don't mind but if you are looking for a way to boot into OFW through SXOS without performing a genuine boot you may need to wait until SXOS comes out with an updated boot.dat file.
To get this to work follow these steps
Generating the emunand Files with EmuTool
(If you want to use a NAND backup to generate the new emunand you can skip to step 1 of "Preparing the New SD card".)
- select SXOS Hidden Partition and select the SD card you want to pull the emunand from.
- "Enable Partition EMU" should be selected if you have a valid emunand on the sd card.
- Then select SXOS File as the Target and for the destination I just picked a random folder I generated on my desktop.
- Start the client and once it is finished make sure all the files are generated [Boot0,Boot1 and Full.00 - Full.07]
Prepare the New SD Card
- Download the Free Version of MiniTool Partition Wizard
- Right click the current partition on the SD card and delete it.
- Then Right click and hit "create". Leave the Partition label blank and select "File System" and choose unformatted.
- Make the partition size 30GB and hit okay. It is very important that this unformatted partition is First!!
- Right click the second partition and hit "create" leave partition label blank and selected exFat or Fat32 as the file System.
- click apply
- Once the Partition Wizard completes the process right click the first 30GB partition we created in step 4 and click "delete". This will change the partition Type to Logical and change the Partition type ID to 0x0 without having to upgrade to a paid version of MiniTool Partition Wizard and you will also see the Used space change from 30GB to 0GB. Click Apply
Transferring the emunand files to the new SD card
- Open EmuTool and Select "SXOS File" as the source and locate the file on the desktop containing the emunand files previously generated in step 4 of "Generating the emunand files" (or your NAND backup files if you have a NAND backup)
- Then as the target select the new SD card and start the client.
- Once the client is finished make sure to move over the old boot.dat, license.dat and Emutendo folder to the new SD card as well.
- Close the client and reopen it, select "SXOS Hidden Partition" as the source and select the New SD card that you just moved the hidden partition to and make sure to select "Enable Partition EMU" if it isn't already selected.
- Close EmuTool and remove the SD card from the computer and test it!
These are the Steps that worked for me, I hope this helps someone else!