Hmm.. then I guess I am doing something wrong.. do you mind going pms?
Grab newest atmos: https://github.com/Atmosphere-NX/Atmosphere/releases
Extract to sd card - Use fusee-primary.bin as your payload
Grab patches: https://github.com/ITotalJustice/patches/releases
Use Fusee.zip - Extract to sd and overwrite atmosphere folder when prompted
Thats it - always the same every update