From Zerox's Citra HD build:
Games that doesn't seem to boot:
Kid Icarus: Uprising(Desc error)
Monster Hunter 4 and X(Desc error)
Chibi-Robo: Zip-Lash(Desc error)
Smash Bros 4 FULL and DEMO(Desc error)
Starfox 64 3D(Desc error)
Virtual Console(Bad Decryption?)
Shin Megamin Tensei 4(Desc error)
Animal Crossing New Leaf(works without sounds)
Mega Man Legacy(Desc error)
Hyrule Warriors Legends(Desc error)
Games that boots but can't play:
Pokemon XY/ORAS(still stuck during cutscene, level up, after naming character, obtain an item or pokemon, entering a room, and many more. Won't crash when Shader JIT is enable)
Super Mario 3D Land(No A button)
Mario Kart 7(infinite loop)
Hatsune Miku: Project Mirai DX(Can't interact activity to Miku-Chan)
Attack on Titan: Humanity in Chains(crash after starting the Story Mode)
Lego City(all of them)
Fire Emblem Awakening(Particles)
Fire Emblem Fates Birthright and Conquest(Bad Decryption?)
The Legend of Zelda: Majora's Mask 3D(lack extras)
That's all.