OK, I have followed your guide:
1: Remove your sd card from your switch and put in a computer.
2: Completely remove the Atmosphere folder and all it's sub folders and files.
3: Download the latest Atmosphere and fusee.bin from github.
4: Extract and place the new Atmosphere on the root of the sd card, also download the latest sigpatches and put them in the relevant folders.
5: Boot your switch and test your installed games launch, if not you have done something wrong.
When I go to System Upate to check the CFW revision, I get a message (small letter, gray colored):
! System Update is ready.
The only place that I can confirm my CFW is AIO Updater:
It reports that I am indeed on 1.3.2|S
(my OFW is still 12.0.3, as I am going to update it last, via Daybreak)
If I attempt to update the CFW via AIO Updater (which only allows me to download the latest version of Atmosphere which is 1.4.0) is goes through the download step, then ask if I want to overwite the .ini, and then confirms if I want to delete custom sysmodules, then my Switch crashes.
2 Questions:
1) Why System Upate does not report my actual CFW revision?
2) Is it safe at this point that I go ahead and install OFW via Daybreak? (I am planning to upgrade to 14.1.2)
Please help!