I swapped my emuNAND and sysNAND successfully and everything seems to work just fine except for the fact that my Pokemon Yellow save is corrupt. I probably should have backed up my save before this but I didn't figure it would get affected. I also tried restoring my original emuNAND to my emuNAND (if that's makes sense) and it still does not work.
So to anyone planning on switching, be aware of this possibility, and if anyone knows a possible fix please let me know.
So to anyone planning on switching, be aware of this possibility, and if anyone knows a possible fix please let me know.