I got the latest Luma with a9lh as well.
Sorry for the long wait, but I got it working! So let me quickly go over my hardships:
-Dumped and decrypted the installed eShop version of the game (no updates) from my N3DSXL (took quite some time)
-Followed the steps. Wasn't sure if I should save or export tables after pressing the Randomize button on PKSM.
-Even though I ran the "setup.bat" with admin privileges, it threw a lot of errors. An hour or so later, it was done.
-I transferred the new CIA (_Leveled.cia) to my N3DSXL.
-Deleted Moon.
-Installed new CIA.
-Attempted to run the game. I was given a window from Ninty asking if I want to download the update.
-I clicked no.
-Game wouldn't load. Stuck on that Nintendo 3DS logo screen.
-Restarted N3DSXL.
-Attempted to run game. I was given a window from Ninty asking me if I want to download and install the update.
-I clicked YES
-Update installed
-Game works just fine
tl;dr: after installing the CIA, connect to the Internet. When you run the game the first time, your 3DS will ask you if you want to download and update. DOWNLOAD AND UPDATE. Then it'll work.