Soooooooo... 
It's well known at this point that @Joom has evolved to a higher level of intelligence than the rest of us and that only he and a select group of people can unhyperban their 3dses. There's a mystery payload that will automatically inject the CTcert and the DeviceID into the itcm.mem file in the 3ds's memory, as seen here.
But there are two ways to get a CTcert, by using dd on the itcm.mem file,
or, as with the only CTcert I can use for this, with Eshop Debugger.
But these two files are fundamentally different. I copied my own dirty CTcert with eshop debugger and with itcm.mem and couldn't find any similarities in the hexeditor, at least not with my non-code centered brain. (Information I tried to use to help me find similarities can be found here.)
Are they encoded completely differently? If so, is there a fathomable way to convert one to another? I can only guess the Eshop Debugger's version of the CTcert comes with a ton of extra data that isn't found in itcm.mem, since it's almost 4 times the size. But that fact doesn't help converting the ECDSA signature. (Which I can only guess is the part of the CTcert I'd care about)
The DeviceID makes no sense either.

It's well known at this point that @Joom has evolved to a higher level of intelligence than the rest of us and that only he and a select group of people can unhyperban their 3dses. There's a mystery payload that will automatically inject the CTcert and the DeviceID into the itcm.mem file in the 3ds's memory, as seen here.
But there are two ways to get a CTcert, by using dd on the itcm.mem file,
Code:
dd if=itcm.mem of=CTCert.bin bs=1 skip=14360 count=104
dd if=itcm.mem of=DeviceID.bin bs=1 skip=14340 count=4
But these two files are fundamentally different. I copied my own dirty CTcert with eshop debugger and with itcm.mem and couldn't find any similarities in the hexeditor, at least not with my non-code centered brain. (Information I tried to use to help me find similarities can be found here.)
Are they encoded completely differently? If so, is there a fathomable way to convert one to another? I can only guess the Eshop Debugger's version of the CTcert comes with a ton of extra data that isn't found in itcm.mem, since it's almost 4 times the size. But that fact doesn't help converting the ECDSA signature. (Which I can only guess is the part of the CTcert I'd care about)
The DeviceID makes no sense either.