Some hack modify code instead of memory and the hack needs a [ ??? disable ] code to disable. What you need to do is disable the code and restart the game. Alternatively examine what is the content of the memory that the code modify and make one that restores it. i.e. create you own [ ??? disable ] code.
If this code is a one liner. i.e. 04000000 AAAAAAAA CCCCCCCC you can quickly create a disable code by pressing + on the cheat to create a bookmark and press ZL+A to create a code. (you have to NOT enable the code for this to work through out the session for this to work)
Pressing + on the code create a bookmark on main+AAAAAAAA.
Pressing ZL+A on the bookmark on main+AAAAAAAA will create a code that hack main+AAAAAAAA to the content currently at main+AAAAAAAA
So I tried disable the codes and reset the game. It turns the cheats back on. I tried deleting the game entirely and installing all over and it instantly enables all the codes. I will try creating a disable code, but I am not sure I understand how that works. Thanks for the help!