Homebrew Pokemon Storage for Gen 4/5

Not really. You can extract the save on the 3DS, and export the individual Pokemon from the save using PkHex or something, but no Bank-like application... yet.
 
You can transfer Gen 5 mons for free with the PokeBank/PokeTransporter, and if you have two DS you can trade directly from Gen 4 to Gen 5 THEN use the transporter. Otherwise (PKHeX supports Gen4/5 .box files for multiple imports at once) use PKHeX.
 

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