yeah,
1. pick format emunand from the gateway menu
2. boot up emunand, go to system settings and make sure you set it up correctly, it will say GW3D, in front of the system version (if it says Ver. 4.x go back and actually do step 1)
3. shutdown the console
4. boot back up into emunand and hold UP when triggering the DS profile exploit, this time DO NOT enter system settings press select and choose a game with the required FW version from your region, and do the prompted update
Bonus step between steps 2 and 3, you can move some stuff around on the homescreen and use that as a visual indicator as to which nand your in, like having a folder named "Emu" on emunand and "Sys" on system nand
you cant use a EU rom to update a US console etc, and you cant use super trimmed roms as they have the update partition removed