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If you didn't ever format your sysNAND or emuNAND then your save data will be accessible from sysNAND. If you have a backup of your emuNAND (with no formats between the save data you want and when you backed it up) then you can access the save data by restoring it. Otherwise, your save data is gone.I deleted my 3ds's emunand partition by mistake.
How can I backup game save data installed on emunand?