I tried using pixel perfect mode and I've been having the exact opposite problem, the touch screen reacts as if I'm in pixel perfect mode when I'm in regular mode. It only seems to happen when I boot up a game, the twilight menus work fine
I was fiddling around with twilight menu screen settings and discovered that you can enter pixel perfect mode by holding select when the software opens, I tried it but then wanted to change it back to regular scaling so I closed the app and...
btw i feel this a good time to remind you guys that sea of thieves was made by rare, who also made DKC1-3 and DK64, alongside banjo kazooie and conker's bad fur day