I updated Luma to 7.0.1 via Luma Updater, and went to play Pokemon Sun. I had a patch on my SD card for Pokemon Sun to remove outlines and after updating the outlines are back.
N3DS 11.4, A9LH Luma 7.0.1
Patch location: /luma/code_sections/0004000000164800.bin
Enable Game Patching has been checked.
N3DS 11.4, A9LH Luma 7.0.1
Patch location: /luma/code_sections/0004000000164800.bin
Enable Game Patching has been checked.