Alright Checkpoint works. To anyone wondering how I do it, just do the following
1. Go to Checkpoint and create a backup copy of your save file
2. Use SD Card adapter so that you can edit the save file from your SD Card
3. Open your computer/laptop and open the village save file editor
4. In the top left of the save file editor, click file and open and go to sdmc:/3ds/Checkpoint/saves/BRAVELYDEFAULT/ click and open COLONY0.sav
5. Once your done editing, put your SD Card back to your 3DS and open Checkpoint
6. Click Bravely Default and and choose restore.
I feel totally dumb, How do I use the program to edit my villagers? not sure where to find COLONY0.sav at on my computer
I made a guide here. Check it out