https://github.com/44670/BootNTR/releases?after=3.2Also, do you have a Copy of the BootNTR 3.1 ? I am thinking it is the only Version that has the ability to go into another Game without a Restart.
if you are using BootNTR Selector:
a. unzip the ntr.bin to the root of your 3ds sd card and choose 3.2
or
b. unzip and rename ntr.bin to ntr_3_3.bin and overwrite the one in your 3ds\bootntrselector folder, and choose 3.3