You could also tell from the decap shots you were on about in the previous thread, indeed if it was going to be debug functionality or some canned feature then that would be more obvious from that.
Functionality nerfed for final release... I doubt it if it was custom from the ground up but dropped features exist. In before TV out or high end debugger discovered.
Most of the time things are grounded to a) provide less resistance to ground (you divide by area after all, and the length aspect can also be a thing here, never mind inductance/impedance considerations for signals), b) possibly serve as different ground in the case of things that don't tolerate noise so well/risk some kind of backfeeding, and c) to avoiding floating voltages. You also get the multiple people maybe working on their own individual element of the die so they kick things over to ground for their little bit to maybe make the job of the integrator that bit easier.
I equally doubt you will get much in the way of hard answers around here -- Nintendo engineers have not really given any talks that I have seen, never mind to that level, so unless it was in the gigaleak or something (and even then you might have to infer from different design stages or what passives surround the CPU where the pins meet the board or any kind of matched impedance traces*) nobody is really going to have heard anything or stopped to consider for terribly long.
*those playing along at home if you pull apart a device and see traces be all wiggly line rather than straight or as near to it as they can do then this is usually going to be matched impedance -- signal delay and strength is good, but if they arrive at different times (incoherent in the more literal definition) you are really troubled where boosting is usually doable enough.
At that point we are waiting on people playing at
, possibly
https://trixter.oldskool.org/2015/04/07/8088-mph-we-break-all-your-emulators/
That level or maybe going in for the high end FGPA... I guess it would be simulation at that point. A GBA would probably be among the things I consider that more probable to happen to but I am not aware of such things just yet (the few FPGA things I have seen being more taken from instruction level than recreation level).