First of all don't get your hopes up It's not working. The Zelda collectors edition has, if you didn't know, n64 and NES emulators. You can separate those emu using a tool called tgctogcm (found this page with a tutorial just scroll down to find it) and run them in dolphin or Nintendont as if they were standalone games. You can use GCRebuilder to view the files in a GC iso, then export the tgc folder in the zelda iso. Open up the command prompt and navigate to the directory with tgctogcm.exe in in and type tgctogcm.exe file.tgc game.iso (replacing file.tcg with zelda_ENG_090903.tgc or majora_ENG_091003.tgc oot and mm respectively). This will output game.iso file in the same directory which you can put on an sd card or usb and run from Nintendont. So you can play zelda 1&2, Ocarina of Time, and Majora's Mask, but say you want to play another Nintendo 64 game. You cannot. But we can try basically all you have to do is open the individual game iso and replace the rom file zle_f.n64 for oot and zelda2e.n64 for mm. The nes games don't have any rom files that I can find (but we got working emulators for the NES so it doesn't matter). once we replace the roms in the iso and load them in dolphin it crashes(that is when replaced with golden eye anyway) . When we try try it in Nintendont it loads fine but we get a black screen and nothing else. We cannot even get to the loading disk screen. I have found that it is probably impossible as the roms that came with the disk might have been edited by Nintendo specifically for the gamecube. The roms work fine in the project 64 emulator. For all we know the emulator might not be any more compatible than Wiii64 if we can ever get it working. You can find GCRebuilder here and tgctogcm.exe here (I didn't upload this file i took it from the forum I linked above).