I don't see why not.
If they CycloDS has the raw save format(.sav), then just rename the .0 save to that.
I've transferred .sav's today my G6 Lite, and G6 Lites saves to my R4 and DS-Linker(which both use .sav). So I don't see why it wouldn't work.
Hopefully Shuny will implement a CycloDS format into his save converter. Since I'll be ordering mine whenever RHS gets them in.