cmoneyr,
I use Rominator to rename mine as they are copied to the flash card. I prefer just to have the name without any additional information.
rwilts,
Unfortunately, I believe they appear in whatever order they happen to be listed in the file table. If you delete then add new games, the old names will generally be replaced with the new ones, and they will not be in any discernable order. You can use one of the programs mentioned earlier in this thread to reorder the file table. But before you do it, you might want to make a backup of the flash card, because sometimes the file table can become corrupted durng this process, and the files will become unreadable (you have to reformat your flash card at that point).
-Bri