Maybe
@Yardape8000 can answer this, or someone more knowledgeable about wupinstaller, but couldn't you possibly take the 3 title files and split the app and h3 files, pairing them off (i see the largest one is 3GB so shouldn't be too hard to just split a few files off to fit on the 16GB SD Card, install that, use the function to remove the sdcard then load up the remaining files and just run the install again but with different files. I glanced at the source but can't really determine how these files get stored on the wiiu.
If the names of the files have any meaning on the wiiu itself, you could possibly do this by "installing" the game twice, but having different files to install each time, they're still part of the same titleid so I'd imagine it might work, but I wouldn't risk my own console testing this.