Most are unnecessary, if u turn of the extra brick protection option and load your syscheck again it will reduce the number of files to install.
Only one of those IOSs will be used by your system menu, ios80 for 4.3 for example. Modmii's system menu IOS supports RC24 and also the patches allow fakesigned channels to still work if moved to the official SD menu. Installing the other files will allow u to avoid brick if u ever accidentally install a different system menu without a corresponding system menu IOS. They're all based on IOS60, so if u try downgrading an lu64+ Wii, it won't brick (which would happen with the stock unstubbed system menu IOS)
Installing priiloader will provide lots more protection, and allow u to enable system menu hacks.
Updating the hbc may improve some apps when launched via the hbc. The important thing is for it to be installed using IOS58 to enable usb2 speeds.
Since your cios's are not being flagged, they should already be fine, and so u won't see any difference in how usb loaders run