I am experiencing what appears to be the same issue. I have had sys-botbase running fine for some time. I am working on it now if I find a fix I will let you know. I have a similar setup but I'm using a dongle to boot instead of a jig/injector. Same software etc. It seems to crash within 30 seconds of the switch getting to the main menu screen.
I'm running this on emunand.
I completely removed sys-botbase before installing usb-bot base because I know they cannot coexist. I feel like there is a piece I missed removing sys-botbase but cannot find it. I removed the 43000xxx folder and of course replaced it in the same structure. The author of usbbot-base recommends removing a file that I don't seem to have. More research but figured I'd toss this out here if others have seen this.
Thx!
The log is anyone is interested:
Atmosphère Fatal Report (v1.1):
Result: 0xF601 (2001-0123)
Program ID: 430000000000000b
Process Name: sys-botbase
Firmware: 11.0.1 (Atmosphère 0.16.2-master-1085ccbe)
General Purpose Registers:
Start Address: 0000000000000000
Stack Trace:
ReturnAddress[00]: 0000000000000000
ReturnAddress[01]: 0000000000000000
ReturnAddress[02]: 0000000000000000
ReturnAddress[03]: 0000000000000000
ReturnAddress[04]: 0000000000000000
ReturnAddress[05]: 0000000000000000
ReturnAddress[06]: 0000000000000000
ReturnAddress[07]: 0000000000000000
ReturnAddress[08]: 0000000000000000
ReturnAddress[09]: 0000000000000000
ReturnAddress[10]: 0000000000000000
ReturnAddress[11]: 0000000000000000
ReturnAddress[12]: 0000000000000000
ReturnAddress[13]: 0000000000000000
ReturnAddress[14]: 0000000000000000
ReturnAddress[15]: 0000000000000000
ReturnAddress[16]: 0000000000000000
ReturnAddress[17]: 0000000000000000
ReturnAddress[18]: 0000000000000000
ReturnAddress[19]: 0000000000000000
ReturnAddress[20]: 0000000000000000
ReturnAddress[21]: 0000000000000000
ReturnAddress[22]: 0000000000000000
ReturnAddress[23]: 0000000000000000
ReturnAddress[24]: 0000000000000000
ReturnAddress[25]: 0000000000000000
ReturnAddress[26]: 0000000000000000
ReturnAddress[27]: 0000000000000000
ReturnAddress[28]: 0000000000000000
ReturnAddress[29]: 0000000000000000
ReturnAddress[30]: 0000000000000000
ReturnAddress[31]: 0000000000000000