Yes it works like rev games it doesn't really merging anything, it just puts the nca files in the secure partition. Content there is loaded as if it was already installed. Basically it's detected as in the gamecard while the xci is loaded.So, if I merge an update into an XCI, the system doesn’t install that update internally? I know with games that have updates on them, when you insert the game it prompts you to install the update that was included on the cart to either the SD card or NAND.
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A no it won't affect it. Did you had installed xenoblade as nsp at a certain point? You can try and archived the game and erase the program then nload it again. But don't worry when the xci is loaded all content inside gets loaded. Although check if it's working because the nut titlerights-remove used to have issues with some xenoblade content, like Torna.Is the original XCI game + NSP update! D: unmounted shows just the 1.0 but when I mount it shows 1.0.1 I don't know if that affect in something, I don't have DevMenu don't know if it works on 6.0.1
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Check permisions, create a shortcut with admin rights or execute cmd with admin rights and point to the batch. You can still dragg and drop over a shortcut.